Transcript: ENSDART00000138722.2 nemp2-204

Description

nuclear envelope integral membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-081104-413]

Gene Synonyms

loc100131211, si:dkey-42h23.3, tmem194b

Location

About this transcript

This transcript has 2 exons, is associated with 153 variant alleles and maps to 114 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000100265.6	nemp2-201	1758	479aa	ENSDARP00000091038.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QYC4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137187.2	nemp2-203	2853	241aa	ENSDARP00000117160.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QQ13	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000132501.3	nemp2-202	955	208aa	ENSDARP00000118567.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0UYT3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000138722.2	nemp2-204	576	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 576 bps,

Version

ENSDART00000138722.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.