Transcript: ENSDART00000084416.6 ablim1a-201

Description

actin binding LIM protein 1a [Source:ZFIN;Acc:ZDB-GENE-080219-41]

Gene Synonyms

zgc:172321

Location

About this transcript

This transcript has 20 exons, is annotated with 50 domains and features, is associated with 2021 variant alleles and maps to 167 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000145705.3	ablim1a-202	4543	693aa	ENSDARP00000115616.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A6I5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000084416.6	ablim1a-201	1986	661aa	ENSDARP00000078851.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q5C0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 1,986 bps, Translation length: 661 residues

Version

ENSDART00000084416.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.