Transcript: ENSDART00000083850.6 sdr42e2-201

Description

short chain dehydrogenase/reductase family 42E, member 2 [Source:ZFIN;Acc:ZDB-GENE-101203-3]

Location

About this transcript

This transcript has 11 exons, is annotated with 8 domains and features, is associated with 813 variant alleles and maps to 78 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000155759.3	sdr42e2-202	1705	444aa	ENSDARP00000128404.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WDV5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000083850.6	sdr42e2-201	1308	435aa	ENSDARP00000078285.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F7D2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,308 bps, Translation length: 435 residues

Version

ENSDART00000083850.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.