Transcript: ENSDART00000149722.3 nipa2-203

Description

NIPA magnesium transporter 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2134]

Location

About this transcript

This transcript has 6 exons, is annotated with 15 domains and features, is associated with 233 variant alleles and maps to 176 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000078316.5	nipa2-201	1634	367aa	ENSDARP00000072778.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P694	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149722.3	nipa2-203	989	252aa	ENSDARP00000124543.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000149068.3	nipa2-202	955	298aa	ENSDARP00000124674.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000150177.2	nipa2-204	952	208aa	ENSDARP00000124462.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 989 bps, Translation length: 252 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000149722.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.