Transcript: ENSDART00000077938.5 c1galt1b-201

Description

core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1b [Source:NCBI gene;Acc:337131]

Gene Synonyms

c1galt1, fa98f05, wu:fa98f05, zgc:66485

Location

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 47 variant alleles and maps to 253 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000077938.5	c1galt1b-201	2016	374aa	ENSDARP00000072404.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QJQ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131793.2	c1galt1b-202	791	225aa	ENSDARP00000118776.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QI18	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 2,016 bps, Translation length: 374 residues

Version

ENSDART00000077938.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.