Transcript: ENSDART00000121415.4 ggnbp2-204

Description

gametogenetin binding protein 2 [Source:NCBI gene;Acc:552967]

Gene Synonyms

im:6901326, zgc:152713

Location

Chromosome 5: 4,016,301-4,049,215 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 8 domains and features, is associated with 943 variant alleles and maps to 459 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000055086.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000121415.4	ggnbp2-204	2337	708aa	ENSDARP00000108530.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G1K2X1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000113627.3	ggnbp2-202	2760	681aa	ENSDARP00000099168.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6PDK1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000105832.6	ggnbp2-201	1979	350aa	ENSDARP00000096610.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q4P6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000132056.3	ggnbp2-205	907	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000115231.5	ggnbp2-203	770	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000137068.3	ggnbp2-206	612	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000144012.2	ggnbp2-208	770	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000142461.2	ggnbp2-207	705	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,337 bps, Translation length: 708 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000121415.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000121415.4 ggnbp2-204

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Transcript: ENSDART00000121415.4 ggnbp2-204

Summary

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