Transcript: ENSDART00000137481.2 tinf2-201

Description

TERF1 (TRF1)-interacting nuclear factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6168]

Gene Synonyms

TIN2, wu:fi37c10, zgc:158289

Location

About this transcript

This transcript has 4 exons, is associated with 351 variant alleles and maps to 45 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000141165.2	tinf2-202	2298	585aa	ENSDARP00000113476.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R9M2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137481.2	tinf2-201	932	130aa	ENSDARP00000113707.1	Nonsense mediated decay	F1QVN3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 932 bps, Translation length: 130 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000137481.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.