Transcript: ENSDART00000151773.3 jade2-202

Description

jade family PHD finger 2 [Source:ZFIN;Acc:ZDB-GENE-120215-66]

Gene Synonyms

phf15, si:ch73-202g8.3

Location

Chromosome 21: 45,386,033-45,399,787 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 22 domains and features, is associated with 571 variant alleles and maps to 100 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000053389.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000075432.6	jade2-201	2388	795aa	ENSDARP00000069915.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F8E2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000186253.1	jade2-203	3001	736aa	ENSDARP00000152711.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RTW2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000151773.3	jade2-202	1808	523aa	ENSDARP00000125761.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3IS93	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,808 bps, Translation length: 523 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000151773.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]

Transcript: ENSDART00000151773.3 jade2-202

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Transcript: ENSDART00000151773.3 jade2-202

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