Transcript: ENSDART00000172980.2 arhgef11-202

Description

Rho guanine nucleotide exchange factor (GEF) 11 [Source:ZFIN;Acc:ZDB-GENE-070604-1]

Location

About this transcript

This transcript has 2 exons, is annotated with 8 domains and features, is associated with 253 variant alleles and maps to 17 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000173073.2	arhgef11-203	5755	852aa	ENSDARP00000142240.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LG62	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000136594.3	arhgef11-201	2252	555aa	ENSDARP00000118588.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S635	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000172980.2	arhgef11-202	521	174aa	ENSDARP00000142086.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LFR2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 521 bps, Translation length: 174 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000172980.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]