Transcript: ENSDART00000139713.2 ark2n-203

Description

arkadia (rnf111) N-terminal like PKA signaling regulator 2n [Source:ZFIN;Acc:ZDB-GENE-040426-1889]

Location

Chromosome 21: 5,042,576-5,056,812 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 13 domains and features, is associated with 411 variant alleles and maps to 41 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000046071.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000067733.6	ark2n-201	1533	335aa	ENSDARP00000067732.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P0T1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000140859.2	ark2n-204	953	269aa	ENSDARP00000113315.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000139713.2	ark2n-203	797	265aa	ENSDARP00000114550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000139268.2	ark2n-202	536	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 797 bps, Translation length: 265 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000139713.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000139713.2 ark2n-203

Summary

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Transcript: ENSDART00000139713.2 ark2n-203

Summary

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