Transcript: ENSDART00000152782.2 myo6a-205

Description

myosin VIa [Source:ZFIN;Acc:ZDB-GENE-040819-2]

Location

Chromosome 20: 733,519-753,930 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 9 domains and features, is associated with 779 variant alleles and maps to 14 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000044016.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135066.3	myo6a-202	5010	1288aa	ENSDARP00000112958.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QCU8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000136768.3	myo6a-203	4988	1253aa	ENSDARP00000115756.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q6Q6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000015558.8	myo6a-201	3762	1253aa	ENSDARP00000027227.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q6Q6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152782.2	myo6a-205	542	181aa	ENSDARP00000126697.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GDY7	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000150014.2	myo6a-204	536	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 542 bps, Translation length: 181 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000152782.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000152782.2 myo6a-205

Summary

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Transcript: ENSDART00000152782.2 myo6a-205

Summary

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