Transcript: ENSDART00000139539.4 si:rp71-7l19.2-201

Description

si:rp71-7l19.2 [Source:ZFIN;Acc:ZDB-GENE-081103-31]

Location

About this transcript

This transcript has 7 exons, is annotated with 32 domains and features, is associated with 63 variant alleles and maps to 93 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000139539.4	si:rp71-7l19.2-201	2989	992aa	ENSDARP00000114570.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QE88	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000184429.1	si:rp71-7l19.2-202	6328	916aa	ENSDARP00000146590.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q203	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,989 bps, Translation length: 992 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000139539.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.