Transcript: ENSDART00000138997.2 si:dkeyp-117h8.4-203

Description

si:dkeyp-117h8.4 [Source:ZFIN;Acc:ZDB-GENE-030804-4]

Location

About this transcript

This transcript has 2 exons, is annotated with 9 domains and features, is associated with 126 variant alleles and maps to 266 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000063137.8	si:dkeyp-117h8.4-201	2417	660aa	ENSDARP00000063136.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RD09	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137457.3	si:dkeyp-117h8.4-202	2063	552aa	ENSDARP00000112875.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000138997.2	si:dkeyp-117h8.4-203	1774	535aa	ENSDARP00000122319.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000144230.3	si:dkeyp-117h8.4-204	520	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,774 bps, Translation length: 535 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000138997.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.