Transcript: ENSDART00000125232.4 nr2c2-201

Description

nuclear receptor subfamily 2, group C, member 2 [Source:ZFIN;Acc:ZDB-GENE-080403-8]

Gene Synonyms

TR4, gb:dq017625, im:6911408

Location

About this transcript

This transcript has 15 exons, is annotated with 27 domains and features, is associated with 368 variant alleles and maps to 306 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000125232.4	nr2c2-201	4077	623aa	ENSDARP00000107308.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6PDV8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000169786.2	nr2c2-202	513	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 4,077 bps, Translation length: 623 residues

Version

ENSDART00000125232.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

3' standard supported extension [Definitions]

RNA-Seq supported partial