Transcript: ENSDART00000060729.6 yrdc-201

Description

yrdC N(6)-threonylcarbamoyltransferase domain containing [Source:ZFIN;Acc:ZDB-GENE-070410-65]

Location

Chromosome 16: 4,182,859-4,190,726 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 7 domains and features, is associated with 4 variant alleles and maps to 101 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000041428.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000060729.6	yrdc-201	1737	263aa	ENSDARP00000060728.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000188592.1	yrdc-203	1687	235aa	ENSDARP00000156493.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4IG71	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000180921.1	yrdc-202	1557	235aa	ENSDARP00000146581.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4IG71	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,737 bps, Translation length: 263 residues

Version

ENSDART00000060729.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000060729.6 yrdc-201

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Transcript: ENSDART00000060729.6 yrdc-201

Summary

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