Transcript: ENSDART00000135028.2 prop1-201

Description

PROP paired-like homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-081107-40]

Gene Synonyms

si:ch211-93n23.5

Location

About this transcript

This transcript has 5 exons, is annotated with 9 domains and features, is associated with 236 variant alleles and maps to 245 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135028.2	prop1-201	832	242aa	ENSDARP00000113013.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6PE50	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000181016.1	prop1-202	852	227aa	ENSDARP00000153804.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QKN2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 832 bps, Translation length: 242 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000135028.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.