Transcript: ENSDART00000167115.2 nelfb-203

Description

negative elongation factor complex member B [Source:ZFIN;Acc:ZDB-GENE-040426-765]

Gene Synonyms

cobra1, fe01e12, wu:fe01e12, zgc:55628

Location

Chromosome 5: 29,548,441-29,559,758 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 11 domains and features, is associated with 684 variant alleles and maps to 152 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000035505.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000167115.2	nelfb-203	2738	609aa	ENSDARP00000141564.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IWG6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000051471.7	nelfb-201	2660	583aa	ENSDARP00000051470.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RDH4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000133949.3	nelfb-202	2269	577aa	ENSDARP00000113671.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6ZM70	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,738 bps, Translation length: 609 residues

Version

ENSDART00000167115.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000167115.2 nelfb-203

Summary

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Transcript: ENSDART00000167115.2 nelfb-203

Summary

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