Transcript: ENSDART00000133286.2 si:ch211-207i1.2-201

Description

si:ch211-207i1.2 [Source:ZFIN;Acc:ZDB-GENE-041014-149]

Location

About this transcript

This transcript has 18 exons, is annotated with 41 domains and features, is associated with 1010 variant alleles and maps to 160 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000152768.3	si:ch211-207i1.2-204	27998	8864aa	ENSDARP00000126725.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GE14	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152145.3	si:ch211-207i1.2-203	23719	7810aa	ENSDARP00000126653.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GDU6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000133286.2	si:ch211-207i1.2-201	3002	1000aa	ENSDARP00000119338.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R583	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000145807.3	si:ch211-207i1.2-202	774	161aa	ENSDARP00000112581.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RD27	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 3,002 bps, Translation length: 1,000 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000133286.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.