Transcript: ENSDART00000187866.1 chst12a-203

Description

carbohydrate (chondroitin 4) sulfotransferase 12a [Source:ZFIN;Acc:ZDB-GENE-081022-13]

Gene Synonyms

C4ST-2, chst12, csht12, zgc:193508, zgc:193523

Location

Chromosome 3: 41,731,566-41,732,941 forward strand.

About this transcript

This transcript has 1 exon, is annotated with 9 domains and features, is associated with 281 variant alleles and maps to 132 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000028786.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000187866.1	chst12a-203	1376	436aa	ENSDARP00000153749.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QL27	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000154401.2	chst12a-202	1458	426aa	ENSDARP00000129589.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DFJ6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000049007.6	chst12a-201	1421	426aa	ENSDARP00000049006.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DFJ6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 1,376 bps, Translation length: 436 residues

Version

ENSDART00000187866.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000187866.1 chst12a-203

Summary

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Transcript: ENSDART00000187866.1 chst12a-203

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