Transcript: ENSDART00000156190.3 scaper-204

Description

S-phase cyclin A-associated protein in the ER [Source:ZFIN;Acc:ZDB-GENE-060303-5]

Gene Synonyms

znf291

Location

About this transcript

This transcript has 21 exons, is annotated with 28 domains and features, is associated with 2077 variant alleles and maps to 294 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000103324.4	scaper-201	4887	1318aa	ENSDARP00000094101.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B1H1L9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000156190.3	scaper-204	2844	875aa	ENSDARP00000128884.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WF80	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000156145.3	scaper-203	530	176aa	ENSDARP00000127774.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WC31	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000153530.2	scaper-202	543	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 2,844 bps, Translation length: 875 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000156190.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.