Transcript: ENSDART00000173926.2 dnajb6b-204

Description

DnaJ heat shock protein family (Hsp40) member B6b [Source:ZFIN;Acc:ZDB-GENE-040426-1122]

Gene Synonyms

dnajb6, zgc:56709

Location

Chromosome 7: 40,536,928-40,578,733 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 17 domains and features, is associated with 833 variant alleles and maps to 87 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000020953.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000010035.7	dnajb6b-201	1824	237aa	ENSDARP00000010641.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LY18	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000173926.2	dnajb6b-204	2898	311aa	ENSDARP00000142741.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NSC8	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000173661.2	dnajb6b-202	694	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000173813.2	dnajb6b-203	706	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,898 bps, Translation length: 311 residues

Version

ENSDART00000173926.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

Transcript: ENSDART00000173926.2 dnajb6b-204

Summary

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Transcript: ENSDART00000173926.2 dnajb6b-204

Summary

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