Transcript: ENSDART00000190718.1

Description

si:ch211-225b10.3 [Source:ZFIN;Acc:ZDB-GENE-130531-53]

Location

Chromosome 12: 30,360,184-30,367,008 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 6 domains and features, is associated with 161 variant alleles and maps to 106 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000020224.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000152900.2	-	1908	365aa	ENSDARP00000127441.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JB19	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000190718.1	-	2784	396aa	ENSDARP00000147158.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RKB9	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000153116.3	-	819	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 2,784 bps, Translation length: 396 residues

Version

ENSDART00000190718.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000190718.1

Summary

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Transcript: ENSDART00000190718.1

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