Transcript: ENSDART00000173803.2 esrp2-204

Description

epithelial splicing regulatory protein 2 [Source:NCBI gene;Acc:572992]

Gene Synonyms

cb404, rbm35b, sb:cb404, zgc:77254

Location

About this transcript

This transcript has 5 exons, is associated with 241 variant alleles and maps to 39 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000009698.11	esrp2-201	3364	736aa	ENSDARP00000015568.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G1K2G8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000075089.6	esrp2-202	3435	711aa	ENSDARP00000069574.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G1K2P5	-
ENSDART00000173456.2	esrp2-203	804	213aa	ENSDARP00000142791.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NSH6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000173803.2	esrp2-204	742	28aa	ENSDARP00000142716.1	Nonsense mediated decay	A0A1D5NSA6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 742 bps, Translation length: 28 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000173803.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.