Transcript: ENSDART00000192553.1 zgc:162339-205

Description

zgc:162339 [Source:ZFIN;Acc:ZDB-GENE-070410-76]

Location

Chromosome 15: 21,712,328-21,719,970 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 11 domains and features, is associated with 1 variant allele and maps to 129 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000016724.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000136151.2	zgc:162339-202	2421	255aa	ENSDARP00000115814.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4QNY5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000192553.1	zgc:162339-205	5133	255aa	ENSDARP00000154849.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4QNY5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141948.3	zgc:162339-203	805	197aa	ENSDARP00000113207.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QGJ9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000052726.7	zgc:162339-201	923	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000147987.3	zgc:162339-204	749	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 5,133 bps, Translation length: 255 residues

Version

ENSDART00000192553.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000192553.1 zgc:162339-205

Summary

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Transcript: ENSDART00000192553.1 zgc:162339-205

Summary

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