Transcript: ENSDART00000151885.2 wdhd1-204

Description

WD repeat and HMG-box DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1665]

Gene Synonyms

AND-1, wu:fa11f10, wu:fb77d12, zgc:92585

Location

Chromosome 17: 15,183,897-15,188,440 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 307 variant alleles and maps to 44 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000015998.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000133710.4	wdhd1-202	3665	1112aa	ENSDARP00000113096.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4J7S6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000110507.4	wdhd1-201	4865	1095aa	ENSDARP00000099718.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F296	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000151885.2	wdhd1-204	499	101aa	ENSDARP00000126539.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7DYL0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000138764.3	wdhd1-203	1466	305aa	ENSDARP00000115064.1	Nonsense mediated decay	F1Q7G1	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 499 bps, Translation length: 101 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000151885.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000151885.2 wdhd1-204

Summary

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Transcript: ENSDART00000151885.2 wdhd1-204

Summary

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