Transcript: ENSDART00000147830.2 atp1b3a-202

Description

ATPase Na+/K+ transporting subunit beta 3a [Source:ZFIN;Acc:ZDB-GENE-990415-167]

Gene Synonyms

atp1b3, cb713, etID309715.2, nakatpb, wu:fa14a07

Location

About this transcript

This transcript has 2 exons, is associated with 255 variant alleles and maps to 119 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000022549.10	atp1b3a-201	2211	278aa	ENSDARP00000013993.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8QHI1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000156406.3	atp1b3a-203	837	114aa	ENSDARP00000129786.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WHS2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000147830.2	atp1b3a-202	826	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 826 bps,

Version

ENSDART00000147830.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.