Transcript: ENSDART00000142708.4 dmtn-204

Description

dematin actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9438]

Gene Synonyms

epb49, fj78f01, si:dkeyp-66d7.2, wu:cegs2341, wu:fj78f01, wu:fq17b06

Location

About this transcript

This transcript has 12 exons, is annotated with 12 domains and features, is associated with 417 variant alleles and maps to 46 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000064615.7	dmtn-201	1194	397aa	ENSDARP00000064614.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FCX5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142708.4	dmtn-204	1636	311aa	ENSDARP00000127950.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WCK6	-
ENSDART00000139722.2	dmtn-202	822	201aa	ENSDARP00000128515.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WE64	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000142146.2	dmtn-203	597	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 1,636 bps, Translation length: 311 residues

Version

ENSDART00000142708.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.