Transcript: ENSDART00000149114.3 hnrnpaba-204

Description

heterogeneous nuclear ribonucleoprotein A/Ba [Source:ZFIN;Acc:ZDB-GENE-030131-185]

Gene Synonyms

hm:zeh1271, hnrnpab, hnrpab, sqd-likeA, wu:fa18g02, wu:fb07b06, wu:fb16c05, zeh1271

Location

Chromosome 14: 6,962,314-6,963,794 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 14 domains and features, is associated with 165 variant alleles and maps to 78 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000007960.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148447.3	hnrnpaba-202	4413	340aa	ENSDARP00000124217.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NYU8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150050.2	hnrnpaba-206	1285	228aa	ENSDARP00000124249.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W446	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000148394.3	hnrnpaba-201	825	232aa	ENSDARP00000125019.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W5P8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000149492.3	hnrnpaba-205	765	163aa	ENSDARP00000124848.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W256	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000149114.3	hnrnpaba-204	689	192aa	ENSDARP00000124556.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W2Z3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148497.2	hnrnpaba-203	787	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 689 bps, Translation length: 192 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000149114.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000149114.3 hnrnpaba-204

Summary

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Transcript: ENSDART00000149114.3 hnrnpaba-204

Summary

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