Transcript: ENSDART00000149978.3 fabp7a-203

Description

fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]

Gene Synonyms

B-FABP, blbp, brain lipid-binding protein, fabp7, wu:fb62f07, wu:fq20b08

Location

About this transcript

This transcript has 5 exons, is associated with 375 variant alleles and maps to 163 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000026180.9	fabp7a-201	710	132aa	ENSDARP00000018865.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9I8N9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149568.2	fabp7a-202	584	117aa	ENSDARP00000123891.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W4L9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000149978.3	fabp7a-203	565	119aa	ENSDARP00000124349.1	Nonsense mediated decay	F8W3N3	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 565 bps, Translation length: 119 residues

Version

ENSDART00000149978.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.