Transcript: ENSDART00000131564.2 brms1la-202

Description

BRMS1 like transcriptional repressor a [Source:NCBI gene;Acc:792017]

Gene Synonyms

brms1l, im:7136473, zgc:114129

Location

About this transcript

This transcript has 3 exons, is annotated with 2 domains and features, is associated with 288 variant alleles and maps to 112 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000003418.10	brms1la-201	2046	323aa	ENSDARP00000008214.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4V8V1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131564.2	brms1la-202	851	78aa	ENSDARP00000120700.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QL39	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000134437.2	brms1la-203	402	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 851 bps, Translation length: 78 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000131564.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.