Transcript: ENSDART00000139260.2 limk2-202

Description

LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]

Gene Synonyms

wu:fa97c09, wu:fk73e11, zgc:91990

Location

About this transcript

This transcript has 2 exons, is associated with 171 variant alleles and maps to 115 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000093185.4	limk2-201	3536	651aa	ENSDARP00000087617.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DG29	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142894.2	limk2-203	781	219aa	ENSDARP00000116700.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2BIG1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000139260.2	limk2-202	416	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 416 bps,

Version

ENSDART00000139260.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.