Transcript: ENSDART00000148513.2 limk1b-202

Description

LIM domain kinase 1b [Source:ZFIN;Acc:ZDB-GENE-110411-106]

Gene Synonyms

si:ch211-13l22.4

Location

About this transcript

This transcript has 6 exons, is annotated with 18 domains and features, is associated with 550 variant alleles and maps to 35 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000004686.10	limk1b-201	2584	615aa	ENSDARP00000021697.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FB16	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148513.2	limk1b-202	806	242aa	ENSDARP00000123970.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W473	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 806 bps, Translation length: 242 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000148513.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.