Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: pnpla7a ENSDARG00000062986

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Description

patatin-like phospholipase domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-070112-1812]

Gene Synonyms

clica, zgc:158748

Location

Chromosome 21: 13,611,178-13,668,358 reverse strand.

GRCz11:CM002905.2

About this gene

This gene has 6 transcripts (splice variants), 210 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000091647.6	pnpla7a-201	1315	328aa	ENSDARP00000086080.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1L2A9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000184408.1	pnpla7a-206	7134	1354aa	ENSDARP00000145895.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F4S2	-
ENSDART00000180323.1	pnpla7a-205	5491	239aa	ENSDARP00000154453.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P5J7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151547.3	pnpla7a-203	4314	1354aa	ENSDARP00000125891.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F4S2	-
ENSDART00000142983.3	pnpla7a-202	860	173aa	ENSDARP00000123365.2	Nonsense mediated decay	E9QCB6	-
ENSDART00000151617.2	pnpla7a-204	852	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Summary

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