Gene: parn ENSDARG00000102634

Description

poly(A)-specific ribonuclease (deadenylation nuclease) [Source:ZFIN;Acc:ZDB-GENE-040426-880]

Location

Chromosome 1: 59,314,675-59,324,539 forward strand.

GRCz11:CM002885.2

About this gene

This gene has 6 transcripts (splice variants), 204 orthologues, 1 paralogue and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000161872.2	parn-203	2509	660aa	ENSDARP00000139131.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IW61	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000160658.2	parn-201	2470	647aa	ENSDARP00000133177.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IHL6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000161981.2	parn-204	751	95aa	ENSDARP00000139642.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000160735.2	parn-202	585	193aa	ENSDARP00000140690.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000169792.2	parn-206	525	91aa	ENSDARP00000137321.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000167095.2	parn-205	770	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Gene: parn ENSDARG00000102634

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Gene: parn ENSDARG00000102634

Summary

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