Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: igsf5a ENSDARG00000087983

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Description

immunoglobulin superfamily, member 5a [Source:ZFIN;Acc:ZDB-GENE-091204-182]

Gene Synonyms

igsf5, si:ch211-231m12.2

Location

Chromosome 10: 39,028,331-39,091,894 reverse strand.

GRCz11:CM002894.2

About this gene

This gene has 3 transcripts (splice variants), 51 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000184505.1	igsf5a-202	4193	322aa	ENSDARP00000157464.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QEG4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000187437.1	igsf5a-203	4049	322aa	ENSDARP00000147550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QEG4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144036.2	igsf5a-201	1466	322aa	ENSDARP00000117822.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QEG4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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