Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ophn1 ENSDARG00000035420

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Description

oligophrenin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-464]

Gene Synonyms

zgc:92603

Location

Chromosome 5: 35,682,681-35,743,741 reverse strand.

GRCz11:CM002889.2

About this gene

This gene has 3 transcripts (splice variants), 203 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000123562.5	ophn1-202	3072	800aa	ENSDARP00000108325.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8WJN2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000046157.7	ophn1-201	1577	266aa	ENSDARP00000046156.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DH84	-
ENSDART00000144654.2	ophn1-203	710	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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