Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: gpatch1 ENSDARG00000033418

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Description

G patch domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040914-65]

Location

Chromosome 7: 38,265,363-38,277,255 forward strand.

GRCz11:CM002891.2

About this gene

This gene has 3 transcripts (splice variants) and 205 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000009386.11	gpatch1-201	3161	975aa	ENSDARP00000014631.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G1K2G6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173613.2	gpatch1-203	293	98aa	ENSDARP00000142648.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000130085.3	gpatch1-202	742	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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