Gene: hps1 ENSDARG00000026170

Description

HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 [Source:ZFIN;Acc:ZDB-GENE-051113-152]

Gene Synonyms

im:7143944, zgc:123240

Location

GRCz11:CM002897.2

About this gene

This gene has 3 transcripts (splice variants), 201 orthologues and is associated with 10 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109822.4	hps1-201	4642	668aa	ENSDARP00000100186.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6PFK5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146112.3	hps1-203	310	56aa	ENSDARP00000115998.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A4P2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000143506.2	hps1-202	827	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary