Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: fam49ba ENSDARG00000020929

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Description

family with sequence similarity 49 member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-9537]

Gene Synonyms

fam49b, fj85c11, wu:fj85c11, zgc:64118

Location

Chromosome 2: 32,215,272-32,262,287 reverse strand.

GRCz11:CM002886.2

About this gene

This gene has 7 transcripts (splice variants), 215 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000039717.6	fam49ba-201	1764	325aa	ENSDARP00000039716.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6TLE5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000056621.6	fam49ba-202	1740	256aa	ENSDARP00000056620.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T343	-
ENSDART00000141418.3	fam49ba-204	1180	256aa	ENSDARP00000122853.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T343	-
ENSDART00000146452.2	fam49ba-207	829	208aa	ENSDARP00000114808.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S653	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000145648.2	fam49ba-205	592	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000145704.2	fam49ba-206	598	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000133591.2	fam49ba-203	533	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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