Gene: vta1 ENSDARG00000013732

Description

vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]

Gene Synonyms

c6orf55, wu:fb08c11, zgc:64104

Location

GRCz11:CM002904.2

About this gene

This gene has 2 transcripts (splice variants) and 203 orthologues.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000067053.6	vta1-201	1550	302aa	ENSDARP00000067052.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RJ50	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000180789.1	vta1-202	4874	303aa	ENSDARP00000146885.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RJY3	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

Summary