Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: rnf2 ENSDARG00000010381

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Description

ring finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5243]

Location

Chromosome 2: 23,351,454-23,361,933 forward strand.

GRCz11:CM002886.2

About this gene

This gene has 3 transcripts (splice variants), 240 orthologues, 6 paralogues and is associated with 83 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000017034.8	rnf2-201	2009	338aa	ENSDARP00000002609.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0H2UKC6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000187760.1	rnf2-203	1048	336aa	ENSDARP00000149390.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q803I4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000154645.2	rnf2-202	351	85aa	ENSDARP00000128022.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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