Gene: dmbx1a ENSDARG00000009922

Description

diencephalon/mesencephalon homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020117-1]

Location

Chromosome 2: 10,183,640-10,192,487 reverse strand.

GRCz11:CM002886.2

About this gene

This gene has 3 transcripts (splice variants), 197 orthologues, 57 paralogues and is associated with 7 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000128535.3	dmbx1a-202	2663	383aa	ENSDARP00000106835.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4IG24	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000189122.1	dmbx1a-203	4226	383aa	ENSDARP00000148506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4IG24	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000017173.10	dmbx1a-201	2731	388aa	ENSDARP00000027577.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8JI10	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

Gene: dmbx1a ENSDARG00000009922

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Gene: dmbx1a ENSDARG00000009922

Summary

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