Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: slc6a22.1 ENSDARG00000000730

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Description

solute carrier family 6 member 22, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030616-629]

Gene Synonyms

si:ch211-263a23.7, si:zc263a23.7, slc6a13

Location

Chromosome 6: 41,118,910-41,138,855 reverse strand.

GRCz11:CM002890.2

About this gene

This gene has 4 transcripts (splice variants), 94 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000132484.3	slc6a22.1-203	2735	575aa	ENSDARP00000120523.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q801U6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000001861.9	slc6a22.1-201	2485	575aa	ENSDARP00000001971.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q801U6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000128723.3	slc6a22.1-202	1570	168aa	ENSDARP00000111385.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KNU7	-
ENSDART00000151055.3	slc6a22.1-204	1551	167aa	ENSDARP00000125706.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3IS42	-

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Summary

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