Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
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External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
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Transcript: Y92H12A.5b.1

Description

DUF2428 domain-containing protein [Source:NCBI gene;Acc:171716]

Location

About this transcript

This transcript has 13 exons, is annotated with 4 domains and features and maps to 66 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
Y92H12A.5b.1	-	5048	1378aa	Y92H12A.5b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	W6RTG0	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Y92H12A.5a.1	-	5030	1375aa	Y92H12A.5a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2AAB7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 5,048 bps, Translation length: 1,378 residues

Version

Y92H12A.5b.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase