Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: Y48G8AL.10c.1

Description

C2H2-type domain-containing protein [Source:NCBI gene;Acc:3565634]

Location

About this transcript

This transcript has 9 exons, is annotated with 54 domains and features and maps to 59 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
Y48G8AL.10a.1	-	3892	1245aa	Y48G8AL.10a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	V6CKC3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Y48G8AL.10b.1	-	2649	882aa	Y48G8AL.10b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	V6CLQ3	-
Y48G8AL.10c.1	-	2613	870aa	Y48G8AL.10c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	V6CLP6	-
Y48G8AL.10d.1	-	1713	570aa	Y48G8AL.10d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	V6CLK2	-
Y48G8AL.10e.1	-	483	160aa	Y48G8AL.10e.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	V6CJ81	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,613 bps, Translation length: 870 residues

Version

Y48G8AL.10c.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase