Transcript: C01C10.2a.1

Description

Uncharacterized protein [Source:NCBI gene;Acc:182067]

Location

About this transcript

This transcript has 6 exons, is annotated with 1 domain and feature and maps to 55 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
C01C10.2b.1	-	1212	289aa	C01C10.2b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AHQ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
C01C10.2a.1	-	1141	204aa	C01C10.2a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q11086	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 1,141 bps, Translation length: 204 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q11086

Version

C01C10.2a.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase