Transcript: Y42A5A.4a.1

Description

Cyclin-dependent kinase-like 1; Protein kinase domain-containing protein [Source:NCBI gene;Acc:189841]

Location

Chromosome V: 11,105,499-11,107,343 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 11 domains and features and maps to 44 oligo probes.

Gene

This transcript is a product of gene WBGene00012779 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
Y42A5A.4b.1	-	1600	484aa	Y42A5A.4b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1NZ10	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Y42A5A.4c.1	-	1152	383aa	Y42A5A.4c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1NZ11	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Y42A5A.4a.1	-	1129	353aa	Y42A5A.4a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9U2H1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,129 bps, Translation length: 353 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9U2H1

Version

Y42A5A.4a.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase

Transcript: Y42A5A.4a.1

Summary

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Transcript: Y42A5A.4a.1

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