Transcript: F55D12.2b.1

Description

CRAL-TRIO domain-containing protein [Source:NCBI gene;Acc:172558]

Location

About this transcript

This transcript has 14 exons, is annotated with 11 domains and features and maps to 59 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
F55D12.2a.1	-	2534	712aa	F55D12.2a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q20833	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
F55D12.2b.1	-	2373	588aa	F55D12.2b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C1P648	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 14, Coding exons: 12, Transcript length: 2,373 bps, Translation length: 588 residues

Version

F55D12.2b.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase