Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: T28F12.3a.1

Description

Son of sevenless homolog [Source:NCBI gene;Acc:178846]

Location

About this transcript

This transcript has 19 exons, is annotated with 35 domains and features and maps to 91 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
T28F12.3a.1	-	5232	1493aa	T28F12.3a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9N5D3	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
T28F12.3b.1	-	5224	1493aa	T28F12.3b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A486WXD9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 5,232 bps, Translation length: 1,493 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9N5D3

Version

T28F12.3a.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase