Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Transcript: T27F6.5c.1

Description

HGTP_anticodon domain-containing protein; Prolyl Amino-acyl tRNA Synthetase; Prolyl-tRNA synthetase [Source:NCBI gene;Acc:173117]

Location

About this transcript

This transcript has 3 exons, is annotated with 6 domains and features and maps to 61 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
T27F6.5a.1	-	1482	454aa	T27F6.5a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O45869	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
T27F6.5d.1	-	1561	138aa	T27F6.5d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5JYY0	-
T27F6.5c.1	-	501	166aa	T27F6.5c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1ZXR9	-
T27F6.5b.1	-	345	114aa	T27F6.5b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1ZXS0	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 501 bps, Translation length: 166 residues

Version

T27F6.5c.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase